BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D02SP1|AL426504
(792 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1756 1305 0.0
>3x_Contig1756
Length = 16846
Score = 1305 bits (642), Expect = 0.0
Identities = 747/792 (94%), Gaps = 7/792 (0%)
Strand = Plus / Minus
Query: 1 gatcatcataaatctctaccagtgtwggatcatgtgttgcwrgctttgaratgcaaatta 60
||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||
Sbjct: 13427 gatcatcataaatctctaccagtgttggatcatgtgttgctggctttgagatgcaaatta 13368
Query: 61 cctgaccgttgggtagattgcatttcaattgtraatwagggaacggacacgcacaatccg 120
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 13367 cctgaccgttgggtagattgcatttcaattgtgaattagggaacggacacgcacaatccg 13308
Query: 121 acttctgtctcacacaatccaatgtctgtggacataaataatgcggacartcattatact 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 13307 acttctgtctcacacaatccaatgtctgtggacataaataatgcggacagtcattat-ct 13249
Query: 181 agagaacatattgctggtaagagccaacatcccgctgttgctgctgtwgctgctgttgct 240
|| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 13248 ag-gaacat-ttgctggtaagagccaacatcccgctgttgctgctgttgctgctgttgct 13191
Query: 241 gtctattctggtracctgaatcgaaaaagaatccagacacagcttgtaaaaagaawgctg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 13190 gtctattctggtgacctgaatcgaaaaagaatccagacacagcttgtaaaaagaatgctg 13131
Query: 301 aaccaawwattagttcccagtaatttcatagtaagttaagatcttcgtawttcgwaatac 360
|||||| ||| |||||||||| |||||||||||||||||||||||||| |||| |||||
Sbjct: 13130 aaccaattatt-gttcccagtagtttcatagtaagttaagatcttcgtatttcgtaatac 13072
Query: 361 wgcaatatgaaatawcaratagcagtgtttagtacctawagtcttgtaaatcttgagcat 420
||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 13071 tgcaatatgaaatatcagatagcagtgtttagtacctatagtcttgtaaatcttg-gcat 13013
Query: 421 ctcttcgaatatttcgaatatttcgcatgtatgccatttawgamaaaaaawcgattttcc 480
|||||||||||||||||||||||||||||||||||||||| || || || |||||||||
Sbjct: 13012 ctcttcgaatatttcgaatatttcgcatgtatgccatttatgacaagtaatcgattttcc 12953
Query: 481 aaaaatctttaaacgtgtaagtattccaaaccaatattttaaagaaawttawaaaaawac 540
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||
Sbjct: 12952 aaaaatctttaaacgtgtaagtattccaaaccaatattttaaagaaatttatgtaaatac 12893
Query: 541 atrarawgactagctcacragggaaaagagactrcaaacaaaaccactgcaggccatcaa 600
|| | | ||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 12892 atgagatgactagctcacgagggaaaagagactgcaaacaaaaccactgcaggccatcaa 12833
Query: 601 agtgccagagtagaggatgtatattggcattgctgaatttgtagggtgcttatgataaaa 660
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 12832 agtgccag-gtagaggatgtatattggcattgctgaatttgt-gggtgcttatgataaaa 12775
Query: 661 ttcttcaccgatgcagttctcattcttcatgtcagttggtgatttttgtttcgtgtttaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12774 ttcttcaccgatgcagttctcattcttcatgtcagttggtgatttttgtttcgtgtttaa 12715
Query: 721 acattgacgcgttatgtgcatcgaagasgtattccagtctattcaagaagcaattggtac 780
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 12714 acattgacgcgttatgtgcatcgaagatgctatccagtctattcaagaagcaattggtac 12655
Query: 781 aatcacagttag 792
||||||||||||
Sbjct: 12654 aatcacagttag 12643
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4475
Number of Sequences: 1807
Number of extensions: 4475
Number of successful extensions: 200
Number of sequences better than 1.0e-20: 1
length of query: 792
length of database: 10,358,551
effective HSP length: 16
effective length of query: 776
effective length of database: 10,329,639
effective search space: 8015799864
effective search space used: 8015799864
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.1 bits)